Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PRSS30P-206ENST00000641773 873 ntBASIC13.87□□□□□ -0.19
GFRA1P56159 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
GFRA1P56159 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.87□□□□□ -0.19
GFRA1P56159 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
GFRA1P56159 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
GFRA1P56159 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 AC092933.1-201ENST00000393644 945 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 BOLA2P3-201ENST00000404566 256 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 ATP5G2P4-201ENST00000442175 420 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 BCRP2-202ENST00000447763 634 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 CROCCP4-201ENST00000457096 498 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 BCRP6-201ENST00000510112 632 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 BCRP7-201ENST00000511549 544 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.86□□□□□ -0.19
GFRA1P56159 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 SAMD11P1-201ENST00000571429 661 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
GFRA1P56159 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
GFRA1P56159 AC087481.3-201ENST00000602886 1894 ntBASIC13.86□□□□□ -0.19
GFRA1P56159 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.86□□□□□ -0.19
GFRA1P56159 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
GFRA1P56159 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
GFRA1P56159 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
GFRA1P56159 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.85□□□□□ -0.19
GFRA1P56159 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
GFRA1P56159 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms