Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 MSTO2P-201ENST00000314835 1709 ntBASIC17.5■□□□□ 0.39
EPHB4P54760 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
EPHB4P54760 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
EPHB4P54760 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.5■□□□□ 0.39
EPHB4P54760 SLC25A24P2-201ENST00000415059 510 ntBASIC17.5■□□□□ 0.39
EPHB4P54760 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.5■□□□□ 0.39
EPHB4P54760 PTP4A1P2-201ENST00000546033 454 ntBASIC17.5■□□□□ 0.39
EPHB4P54760 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.5■□□□□ 0.39
EPHB4P54760 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.5■□□□□ 0.39
EPHB4P54760 RN7SL560P-201ENST00000577943 264 ntBASIC17.5■□□□□ 0.39
EPHB4P54760 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.5■□□□□ 0.39
EPHB4P54760 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
EPHB4P54760 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EPHB4P54760 AC073347.1-201ENST00000421633 2643 ntBASIC17.5■□□□□ 0.39
EPHB4P54760 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB4P54760 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.49■□□□□ 0.39
EPHB4P54760 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 MIR663B-201ENST00000408361 115 ntBASIC17.49■□□□□ 0.39
EPHB4P54760 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB4P54760 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 FAM86LP-201ENST00000478302 853 ntBASIC17.49■□□□□ 0.39
EPHB4P54760 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
EPHB4P54760 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB4P54760 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.49■□□□□ 0.39
EPHB4P54760 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB4P54760 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.49■□□□□ 0.39
EPHB4P54760 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EPHB4P54760 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
EPHB4P54760 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EPHB4P54760 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB4P54760 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.48■□□□□ 0.39
EPHB4P54760 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
EPHB4P54760 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB4P54760 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB4P54760 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
EPHB4P54760 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB4P54760 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.48■□□□□ 0.39
EPHB4P54760 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms