Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 MIR346-201ENST00000362234 95 ntBASIC13.89□□□□□ -0.19
SRP9P49458 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 AC023141.5-201ENST00000458585 616 ntBASIC13.89□□□□□ -0.19
SRP9P49458 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SRP9P49458 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
SRP9P49458 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.89□□□□□ -0.19
SRP9P49458 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.89□□□□□ -0.19
SRP9P49458 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.89□□□□□ -0.19
SRP9P49458 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SRP9P49458 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SRP9P49458 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 AC009090.5-201ENST00000624886 2285 ntBASIC13.88□□□□□ -0.19
SRP9P49458 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.88□□□□□ -0.19
SRP9P49458 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.88□□□□□ -0.19
SRP9P49458 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 AC084121.4-201ENST00000641598 221 ntBASIC13.88□□□□□ -0.19
SRP9P49458 AF228730.8-201ENST00000642140 221 ntBASIC13.88□□□□□ -0.19
SRP9P49458 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 LINC01230-201ENST00000625222 3017 ntBASIC13.88□□□□□ -0.19
SRP9P49458 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SRP9P49458 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SRP9P49458 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SRP9P49458 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SRP9P49458 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.87□□□□□ -0.19
SRP9P49458 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.87□□□□□ -0.19
SRP9P49458 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SRP9P49458 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms