Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
NKX2-1P43699 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
NKX2-1P43699 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
NKX2-1P43699 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 AC006504.5-208ENST00000588784 2401 ntBASIC12.8□□□□□ -0.36
NKX2-1P43699 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-1P43699 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.8□□□□□ -0.36
NKX2-1P43699 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-1P43699 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-1P43699 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 AC024267.1-201ENST00000582320 895 ntBASIC12.8□□□□□ -0.36
NKX2-1P43699 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.8□□□□□ -0.36
NKX2-1P43699 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
NKX2-1P43699 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
NKX2-1P43699 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.8□□□□□ -0.36
NKX2-1P43699 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.79□□□□□ -0.36
NKX2-1P43699 AC004987.2-201ENST00000395959 1148 ntBASIC12.79□□□□□ -0.36
NKX2-1P43699 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
NKX2-1P43699 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.79□□□□□ -0.36
NKX2-1P43699 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.79□□□□□ -0.36
NKX2-1P43699 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms