Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
GRIA1P42261 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.77■□□□□ 0.12
GRIA1P42261 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
GRIA1P42261 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 AC013726.1-201ENST00000563747 2285 ntBASIC15.77■□□□□ 0.12
GRIA1P42261 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
GRIA1P42261 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 AC027369.6-201ENST00000525520 931 ntBASIC15.77■□□□□ 0.12
GRIA1P42261 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.77■□□□□ 0.12
GRIA1P42261 AC044860.1-202ENST00000559481 777 ntBASIC15.77■□□□□ 0.12
GRIA1P42261 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.77■□□□□ 0.12
GRIA1P42261 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.77■□□□□ 0.12
GRIA1P42261 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GRIA1P42261 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.77■□□□□ 0.11
GRIA1P42261 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 FGD5P1-202ENST00000614866 2498 ntBASIC15.77■□□□□ 0.11
GRIA1P42261 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.77■□□□□ 0.11
GRIA1P42261 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.77■□□□□ 0.11
GRIA1P42261 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
GRIA1P42261 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GRIA1P42261 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 REXO1L2P-201ENST00000425429 2069 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC015922.1-201ENST00000421102 1152 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 RN7SL618P-201ENST00000477850 296 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 AC097493.3-201ENST00000509725 367 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC069120.2-201ENST00000524091 540 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC025678.2-201ENST00000562061 970 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.76■□□□□ 0.11
GRIA1P42261 AL844908.2-201ENST00000609461 460 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GRIA1P42261 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.76■□□□□ 0.11
GRIA1P42261 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.76■□□□□ 0.11
GRIA1P42261 AC023908.3-201ENST00000564211 3047 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 AC099063.4-201ENST00000641099 1602 ntBASIC15.76■□□□□ 0.11
GRIA1P42261 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GRIA1P42261 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
GRIA1P42261 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
GRIA1P42261 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.75■□□□□ 0.11
GRIA1P42261 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GRIA1P42261 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
GRIA1P42261 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GRIA1P42261 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.75■□□□□ 0.11
GRIA1P42261 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GRIA1P42261 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.75■□□□□ 0.11
GRIA1P42261 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GRIA1P42261 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms