Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 MROH4P-201ENST00000431302 1578 ntBASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AC084364.1-201ENST00000551967 1556 ntBASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 MCCD1P2-201ENST00000423228 335 ntBASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 POLD2P1-201ENST00000511220 997 ntBASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AC040169.1-201ENST00000565382 521 ntBASIC14.49□□□□□ -0.09
TNFRSF1BP20333 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.49□□□□□ -0.09
TNFRSF1BP20333 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.48□□□□□ -0.09
TNFRSF1BP20333 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms