Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 FGD5P1-202ENST00000614866 2498 ntBASIC16.34■□□□□ 0.21
RARAP10276 AJ011931.1-201ENST00000618749 2492 ntBASIC16.34■□□□□ 0.21
RARAP10276 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RARAP10276 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.34■□□□□ 0.21
RARAP10276 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.34■□□□□ 0.21
RARAP10276 AC107890.1-201ENST00000422478 521 ntBASIC16.34■□□□□ 0.21
RARAP10276 KRT18P64-201ENST00000434946 1219 ntBASIC16.34■□□□□ 0.21
RARAP10276 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.34■□□□□ 0.21
RARAP10276 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 AC010336.2-201ENST00000564226 506 ntBASIC16.34■□□□□ 0.21
RARAP10276 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.34■□□□□ 0.21
RARAP10276 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RARAP10276 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RARAP10276 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RARAP10276 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 LINC00552-201ENST00000625151 2579 ntBASIC16.33■□□□□ 0.21
RARAP10276 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.33■□□□□ 0.21
RARAP10276 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.33■□□□□ 0.21
RARAP10276 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 ZBED1P1-201ENST00000502364 1930 ntBASIC16.33■□□□□ 0.21
RARAP10276 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.33■□□□□ 0.21
RARAP10276 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.33■□□□□ 0.21
RARAP10276 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RARAP10276 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RARAP10276 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.33■□□□□ 0.2
RARAP10276 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 AC092580.3-201ENST00000430932 139 ntBASIC16.33■□□□□ 0.2
RARAP10276 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 AC027369.6-201ENST00000525520 931 ntBASIC16.33■□□□□ 0.2
RARAP10276 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 KRT18P28-201ENST00000453838 1332 ntBASIC16.33■□□□□ 0.2
RARAP10276 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.33■□□□□ 0.2
RARAP10276 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.33■□□□□ 0.2
RARAP10276 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RARAP10276 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RARAP10276 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms