Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 AC107308.1-201ENST00000615897 301 ntBASIC13.4□□□□□ -0.26
VSIG8P0DPA2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 AC009452.1-201ENST00000640823 606 ntBASIC13.4□□□□□ -0.26
VSIG8P0DPA2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 AC140479.7-201ENST00000636301 2332 ntBASIC13.4□□□□□ -0.26
VSIG8P0DPA2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.4□□□□□ -0.26
VSIG8P0DPA2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
VSIG8P0DPA2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ADH5P3-201ENST00000433842 1137 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 SPCS2P4-201ENST00000436160 681 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC112482.1-201ENST00000492080 688 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 RNA5SP416-201ENST00000516838 111 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 LINC01225-203ENST00000563550 1244 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MIR3687-2-201ENST00000577708 61 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AL451064.1-201ENST00000607718 471 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MIR3687-1-201ENST00000614492 61 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 AC084364.1-201ENST00000551967 1556 ntBASIC13.39□□□□□ -0.27
VSIG8P0DPA2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VSIG8P0DPA2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms