Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 DBET-201ENST00000630918 3363 ntBASIC18.57■□□□□ 0.56
POLR3DP05423 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.57■□□□□ 0.56
POLR3DP05423 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
POLR3DP05423 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 AC015910.1-201ENST00000579400 975 ntBASIC18.57■□□□□ 0.56
POLR3DP05423 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.57■□□□□ 0.56
POLR3DP05423 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.57■□□□□ 0.56
POLR3DP05423 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.57■□□□□ 0.56
POLR3DP05423 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.57■□□□□ 0.56
POLR3DP05423 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
POLR3DP05423 AC092384.3-202ENST00000564646 2873 ntBASIC18.56■□□□□ 0.56
POLR3DP05423 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
POLR3DP05423 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
POLR3DP05423 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 ACTG1P3-201ENST00000431775 1114 ntBASIC18.56■□□□□ 0.56
POLR3DP05423 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.56■□□□□ 0.56
POLR3DP05423 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.56■□□□□ 0.56
POLR3DP05423 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.56■□□□□ 0.56
POLR3DP05423 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 BTNL10-201ENST00000595971 695 ntBASIC18.56■□□□□ 0.56
POLR3DP05423 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
POLR3DP05423 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.56■□□□□ 0.56
POLR3DP05423 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.56■□□□□ 0.56
POLR3DP05423 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
POLR3DP05423 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
POLR3DP05423 AC073347.1-201ENST00000421633 2643 ntBASIC18.55■□□□□ 0.56
POLR3DP05423 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
POLR3DP05423 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR3DP05423 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
POLR3DP05423 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR3DP05423 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.55■□□□□ 0.56
POLR3DP05423 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 SLC25A47P1-201ENST00000531577 414 ntBASIC18.55■□□□□ 0.56
POLR3DP05423 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.55■□□□□ 0.56
POLR3DP05423 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 MIR5189-201ENST00000577370 114 ntBASIC18.55■□□□□ 0.56
POLR3DP05423 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.55■□□□□ 0.56
POLR3DP05423 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 AL512343.1-201ENST00000605837 169 ntBASIC18.55■□□□□ 0.56
POLR3DP05423 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
POLR3DP05423 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.55■□□□□ 0.56
POLR3DP05423 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms