Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.51■□□□□ 0.07
CAPNS1P04632 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.5■□□□□ 0.07
CAPNS1P04632 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPNS1P04632 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 AC007551.1-201ENST00000457394 519 ntBASIC15.5■□□□□ 0.07
CAPNS1P04632 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPNS1P04632 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 AL033527.5-202ENST00000641632 1098 ntBASIC15.5■□□□□ 0.07
CAPNS1P04632 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.5■□□□□ 0.07
CAPNS1P04632 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CAPNS1P04632 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.5■□□□□ 0.07
CAPNS1P04632 AC106881.1-201ENST00000605849 3329 ntBASIC15.5■□□□□ 0.07
CAPNS1P04632 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.5■□□□□ 0.07
CAPNS1P04632 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.5■□□□□ 0.07
CAPNS1P04632 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.49■□□□□ 0.07
CAPNS1P04632 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CAPNS1P04632 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AL359258.3-201ENST00000622910 2331 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 CICP23-201ENST00000605013 2741 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
CAPNS1P04632 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPNS1P04632 FO681548.1-201ENST00000455617 1132 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPNS1P04632 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.49■□□□□ 0.07
CAPNS1P04632 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.49■□□□□ 0.07
CAPNS1P04632 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 PRAL-201ENST00000624952 3286 ntBASIC15.49■□□□□ 0.07
CAPNS1P04632 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CAPNS1P04632 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.49■□□□□ 0.07
CAPNS1P04632 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.48■□□□□ 0.07
CAPNS1P04632 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms