Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.42■□□□□ 0.06
TLR4O00206 AL133267.1-201ENST00000398220 340 ntBASIC15.42■□□□□ 0.06
TLR4O00206 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 AL355994.2-201ENST00000447882 704 ntBASIC15.42■□□□□ 0.06
TLR4O00206 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.42■□□□□ 0.06
TLR4O00206 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.42■□□□□ 0.06
TLR4O00206 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TLR4O00206 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
TLR4O00206 AC079316.1-201ENST00000548397 411 ntBASIC15.42■□□□□ 0.06
TLR4O00206 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.42■□□□□ 0.06
TLR4O00206 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.42■□□□□ 0.06
TLR4O00206 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
TLR4O00206 AC011477.6-201ENST00000604980 1927 ntBASIC15.42■□□□□ 0.06
TLR4O00206 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.42■□□□□ 0.06
TLR4O00206 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TLR4O00206 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.41■□□□□ 0.06
TLR4O00206 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.41■□□□□ 0.06
TLR4O00206 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.41■□□□□ 0.06
TLR4O00206 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.41■□□□□ 0.06
TLR4O00206 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TLR4O00206 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TLR4O00206 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.41■□□□□ 0.06
TLR4O00206 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.41■□□□□ 0.06
TLR4O00206 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.41■□□□□ 0.06
TLR4O00206 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TLR4O00206 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
TLR4O00206 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.4■□□□□ 0.06
TLR4O00206 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
TLR4O00206 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TLR4O00206 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms