Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 CICP11-201ENST00000434745 2827 ntBASIC13.35□□□□□ -0.27
TMEM235A6NFC5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TMEM235A6NFC5 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 ACE3P-201ENST00000423435 1973 ntBASIC13.34□□□□□ -0.27
TMEM235A6NFC5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 WASH3P-207ENST00000560956 1394 ntBASIC13.34□□□□□ -0.27
TMEM235A6NFC5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 FO538757.1-201ENST00000623083 1397 ntBASIC13.34□□□□□ -0.27
TMEM235A6NFC5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 AC105233.2-201ENST00000523697 349 ntBASIC13.34□□□□□ -0.27
TMEM235A6NFC5 AF228730.5-201ENST00000530288 346 ntBASIC13.34□□□□□ -0.27
TMEM235A6NFC5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TMEM235A6NFC5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.33□□□□□ -0.27
TMEM235A6NFC5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.33□□□□□ -0.27
TMEM235A6NFC5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
TMEM235A6NFC5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM235A6NFC5 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TMEM235A6NFC5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 CYP4F24P-201ENST00000586049 1580 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 AC041040.2-201ENST00000622926 2899 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 PTENP1-202ENST00000532280 3996 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 RNA5SP410-201ENST00000516285 106 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 RNA5SP415-201ENST00000517246 115 ntBASIC13.33□□□□□ -0.28
TMEM235A6NFC5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
TMEM235A6NFC5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms