Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 LSM12P1-201ENST00000411836 588 ntBASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 HLA-F-220ENST00000434407 884 ntBASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AC005622.1-201ENST00000636801 1703 ntBASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AC127383.1-201ENST00000444697 1800 ntBASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 DDX12P-201ENST00000432996 2947 ntBASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 PC-214ENST00000628663 1470 ntTSL 5 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
LINC01558Q9Y6Z2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC004951.3-201ENST00000418645 1148 ntBASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC136604.1-202ENST00000425471 771 ntBASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC003958.1-201ENST00000435883 421 ntBASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms