Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TMEM261P1-201ENST00000604899 340 ntBASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A3BPQ9Y5P4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.39■□□□□ 0.38
COL4A3BPQ9Y5P4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL4A3BPQ9Y5P4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL4A3BPQ9Y5P4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 AL109954.1-202ENST00000564051 2148 ntBASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL4A3BPQ9Y5P4 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC103702.1-201ENST00000548801 2630 ntBASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC023157.3-201ENST00000619086 2088 ntBASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 INE1-201ENST00000456273 945 ntBASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.38■□□□□ 0.37
COL4A3BPQ9Y5P4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms