Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.13■□□□□ 0.17
HPS4Q9NQG7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.13■□□□□ 0.17
HPS4Q9NQG7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 HYMAI-201ENST00000635591 3347 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 AC026410.3-201ENST00000514280 936 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 RNA5SP412-201ENST00000516234 123 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 AC244669.2-201ENST00000612320 853 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 TUBB1P2-201ENST00000422712 1306 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 TUBB1P1-201ENST00000503144 1300 ntBASIC16.12■□□□□ 0.17
HPS4Q9NQG7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HPS4Q9NQG7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 DRD5P1-201ENST00000456605 1438 ntBASIC16.11■□□□□ 0.17
HPS4Q9NQG7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.11■□□□□ 0.17
HPS4Q9NQG7 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HPS4Q9NQG7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms