Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ARID3AQ99856 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.87■□□□□ 0.45
ARID3AQ99856 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.87■□□□□ 0.45
ARID3AQ99856 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.87■□□□□ 0.45
ARID3AQ99856 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.87■□□□□ 0.45
ARID3AQ99856 AL031055.1-201ENST00000606362 631 ntBASIC17.87■□□□□ 0.45
ARID3AQ99856 AC007064.4-201ENST00000637740 555 ntBASIC17.87■□□□□ 0.45
ARID3AQ99856 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.87■□□□□ 0.45
ARID3AQ99856 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.87■□□□□ 0.45
ARID3AQ99856 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
ARID3AQ99856 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ARID3AQ99856 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ARID3AQ99856 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 SSR4P1-203ENST00000599569 2260 ntBASIC17.87■□□□□ 0.45
ARID3AQ99856 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
ARID3AQ99856 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 CICP17-201ENST00000418553 2377 ntBASIC17.87■□□□□ 0.45
ARID3AQ99856 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
ARID3AQ99856 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.87■□□□□ 0.45
ARID3AQ99856 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ARID3AQ99856 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ARID3AQ99856 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
ARID3AQ99856 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.86■□□□□ 0.45
ARID3AQ99856 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.86■□□□□ 0.45
ARID3AQ99856 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.86■□□□□ 0.45
ARID3AQ99856 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.86■□□□□ 0.45
ARID3AQ99856 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.86■□□□□ 0.45
ARID3AQ99856 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC17.86■□□□□ 0.45
ARID3AQ99856 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.86■□□□□ 0.45
ARID3AQ99856 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ARID3AQ99856 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.86■□□□□ 0.45
ARID3AQ99856 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ARID3AQ99856 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.85■□□□□ 0.45
ARID3AQ99856 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.85■□□□□ 0.45
ARID3AQ99856 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ARID3AQ99856 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ARID3AQ99856 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.85■□□□□ 0.45
ARID3AQ99856 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
ARID3AQ99856 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
ARID3AQ99856 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.85■□□□□ 0.45
ARID3AQ99856 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ARID3AQ99856 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms