Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AL160237.2-201ENST00000556165 472 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 MIR3180-1-201ENST00000580374 94 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 MIR3180-3-201ENST00000584616 94 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AC006557.2-201ENST00000592985 1240 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 GGTLC5P-201ENST00000617623 998 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 REXO1L2P-201ENST00000425429 2069 ntBASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC11.87□□□□□ -0.51
AP1S3Q96PC3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TMBIM7P-203ENST00000641617 1718 ntBASIC11.86□□□□□ -0.51
AP1S3Q96PC3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 ELK2BP-201ENST00000415014 1224 ntBASIC11.86□□□□□ -0.51
AP1S3Q96PC3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 AL049597.2-201ENST00000565575 961 ntBASIC11.86□□□□□ -0.51
AP1S3Q96PC3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 AC087388.1-201ENST00000571370 1112 ntBASIC11.86□□□□□ -0.51
AP1S3Q96PC3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AP1S3Q96PC3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms