Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 MEIS3P1-201ENST00000495167 958 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 RRP7BP-205ENST00000566851 833 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AC099568.2-201ENST00000609194 695 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 Z97205.2-201ENST00000564697 1639 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 CU639417.3-201ENST00000624240 1404 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 REXO1L1P-202ENST00000608646 1974 ntBASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
SH3KBP1Q96B97 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 NME2P1-201ENST00000426182 414 ntBASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.48■□□□□ 0.07
SH3KBP1Q96B97 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 KRT17P7-201ENST00000451704 1104 ntBASIC15.47■□□□□ 0.07
SH3KBP1Q96B97 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms