Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 ZPLD1-204ENST00000491959 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
SVIPQ8NHG7 TCF4-205ENST00000537578 2767 ntTSL 2 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 ETNK2-201ENST00000367197 843 ntTSL 3 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 SASH1-204ENST00000622663 5075 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 CLP1-205ENST00000533682 2435 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 LRIT2-202ENST00000538192 3177 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 FAM13B-202ENST00000420893 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 LHX6-202ENST00000373754 3278 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 UPK1B-201ENST00000264234 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 UHRF1-205ENST00000620565 3965 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 EIF5B-205ENST00000617677 4698 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 ARMC8-204ENST00000461822 2221 ntTSL 2 BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SVIPQ8NHG7 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ABCG1-202ENST00000347800 2923 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 MAGEB3-201ENST00000361644 2305 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 GLOD4-201ENST00000301328 1809 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 CPEB1-215ENST00000617958 2776 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TRPV2-201ENST00000338560 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 CCDC173-203ENST00000447353 2181 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ZNF766-202ENST00000593612 2331 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 ATG16L1-203ENST00000392017 3405 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TSPAN1-201ENST00000372003 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 AL031686.1-201ENST00000472805 3876 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
SVIPQ8NHG7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC9.44□□□□□ -0.9
SVIPQ8NHG7 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms