RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
LRIT2-202ENST00000538192 SHROOM4Q9ULL8 1493 aa19.78■□□□□ 0.76
LRIT2-202ENST00000538192 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
LRIT2-202ENST00000538192 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
LRIT2-202ENST00000538192 ZCCHC6Q5VYS8 1495 aaKnown RBP19.06■□□□□ 0.64
LRIT2-202ENST00000538192 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
LRIT2-202ENST00000538192 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
LRIT2-202ENST00000538192 MYO15BQ96JP2 1530 aa18.41■□□□□ 0.54
LRIT2-202ENST00000538192 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
LRIT2-202ENST00000538192 SCRIBQ14160 1630 aa18.22■□□□□ 0.51
LRIT2-202ENST00000538192 ABCC9O60706 1549 aa18.21■□□□□ 0.51
LRIT2-202ENST00000538192 LOC105371045A0A1W2PR82 267 aa18.2■□□□□ 0.5
LRIT2-202ENST00000538192 PCGF6Q9BYE7 350 aa18.12■□□□□ 0.49
LRIT2-202ENST00000538192 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
LRIT2-202ENST00000538192 FAM9AQ8IZU1 332 aaPredicted RBP18■□□□□ 0.47
LRIT2-202ENST00000538192 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
LRIT2-202ENST00000538192 RSF1Q96T23 1441 aaPredicted RBP17.96■□□□□ 0.47
LRIT2-202ENST00000538192 TRIM41Q8WV44 630 aa17.91■□□□□ 0.46
LRIT2-202ENST00000538192 HRCP23327 699 aa17.86■□□□□ 0.45
LRIT2-202ENST00000538192 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
LRIT2-202ENST00000538192 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
LRIT2-202ENST00000538192 PPARGC1BQ86YN6 1023 aaKnown RBP17.75■□□□□ 0.43
LRIT2-202ENST00000538192 NACADO15069 1562 aa17.73■□□□□ 0.43
LRIT2-202ENST00000538192 MROH2BQ7Z745 1585 aa17.68■□□□□ 0.42
LRIT2-202ENST00000538192 WIZO95785 1651 aa17.58■□□□□ 0.41
LRIT2-202ENST00000538192 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
LRIT2-202ENST00000538192 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
LRIT2-202ENST00000538192 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
LRIT2-202ENST00000538192 MYT1Q01538 1121 aa17.38■□□□□ 0.37
LRIT2-202ENST00000538192 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
LRIT2-202ENST00000538192 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
LRIT2-202ENST00000538192 ABCC8Q09428 1581 aa17.27■□□□□ 0.36
LRIT2-202ENST00000538192 CCDC88BA6NC98 1476 aa17.24■□□□□ 0.35
LRIT2-202ENST00000538192 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
LRIT2-202ENST00000538192 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
LRIT2-202ENST00000538192 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
LRIT2-202ENST00000538192 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
LRIT2-202ENST00000538192 SOGA1O94964 1423 aa17.12■□□□□ 0.33
LRIT2-202ENST00000538192 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
LRIT2-202ENST00000538192 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
LRIT2-202ENST00000538192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.1■□□□□ 0.33
LRIT2-202ENST00000538192 ZEB1P37275 1124 aaPredicted RBP17.06■□□□□ 0.32
LRIT2-202ENST00000538192 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
LRIT2-202ENST00000538192 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
LRIT2-202ENST00000538192 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
LRIT2-202ENST00000538192 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
LRIT2-202ENST00000538192 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
LRIT2-202ENST00000538192 CEP162Q5TB80 1403 aa16.96■□□□□ 0.3
LRIT2-202ENST00000538192 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
LRIT2-202ENST00000538192 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
LRIT2-202ENST00000538192 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
LRIT2-202ENST00000538192 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.29
LRIT2-202ENST00000538192 HNRNPUL2Q1KMD3 747 aaKnown RBP16.79■□□□□ 0.28
LRIT2-202ENST00000538192 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
LRIT2-202ENST00000538192 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
LRIT2-202ENST00000538192 EEA1Q15075 1411 aa16.76■□□□□ 0.27
LRIT2-202ENST00000538192 APLP2Q06481 763 aa16.74■□□□□ 0.27
LRIT2-202ENST00000538192 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
LRIT2-202ENST00000538192 GTF3C3Q9Y5Q9 886 aa16.69■□□□□ 0.26
LRIT2-202ENST00000538192 NEUROD1Q13562 356 aa16.68■□□□□ 0.26
LRIT2-202ENST00000538192 CLIP1P30622 1438 aa16.68■□□□□ 0.26
LRIT2-202ENST00000538192 CEP164Q9UPV0 1460 aa16.66■□□□□ 0.26
LRIT2-202ENST00000538192 RAPGEF2Q9Y4G8 1499 aa16.66■□□□□ 0.26
LRIT2-202ENST00000538192 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
LRIT2-202ENST00000538192 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
LRIT2-202ENST00000538192 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
LRIT2-202ENST00000538192 VPS8Q8N3P4 1428 aa16.5■□□□□ 0.23
LRIT2-202ENST00000538192 KIF21BO75037 1637 aa16.5■□□□□ 0.23
LRIT2-202ENST00000538192 ITGAEP38570 1179 aa16.48■□□□□ 0.23
LRIT2-202ENST00000538192 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
LRIT2-202ENST00000538192 NCAPD3P42695 1498 aa16.46■□□□□ 0.23
LRIT2-202ENST00000538192 KANK4Q5T7N3 995 aaPredicted RBP16.44■□□□□ 0.22
LRIT2-202ENST00000538192 CUX1P39880 1505 aa16.43■□□□□ 0.22
LRIT2-202ENST00000538192 YTHDC1Q96MU7 727 aaKnown RBP16.42■□□□□ 0.22
LRIT2-202ENST00000538192 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
LRIT2-202ENST00000538192 KIF27Q86VH2 1401 aa16.4■□□□□ 0.22
LRIT2-202ENST00000538192 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
LRIT2-202ENST00000538192 P3H3Q8IVL6 736 aa16.38■□□□□ 0.21
LRIT2-202ENST00000538192 HMGXB3Q12766 1538 aa16.37■□□□□ 0.21
LRIT2-202ENST00000538192 CENPBP07199 599 aaPredicted RBP16.37■□□□□ 0.21
LRIT2-202ENST00000538192 CFTRP13569 1480 aa16.35■□□□□ 0.21
LRIT2-202ENST00000538192 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
LRIT2-202ENST00000538192 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
LRIT2-202ENST00000538192 CUX2O14529 1486 aa16.34■□□□□ 0.21
LRIT2-202ENST00000538192 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
LRIT2-202ENST00000538192 PRKCSHP14314 528 aaPredicted RBP16.3■□□□□ 0.2
LRIT2-202ENST00000538192 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
LRIT2-202ENST00000538192 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
LRIT2-202ENST00000538192 MIER1Q8N108 512 aa16.24■□□□□ 0.19
LRIT2-202ENST00000538192 IGF1RP08069 1367 aa16.23■□□□□ 0.19
LRIT2-202ENST00000538192 CARMIL1Q5VZK9 1371 aa16.21■□□□□ 0.19
LRIT2-202ENST00000538192 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
LRIT2-202ENST00000538192 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
LRIT2-202ENST00000538192 FAM50AQ14320 339 aaKnown RBP16.2■□□□□ 0.18
LRIT2-202ENST00000538192 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LRIT2-202ENST00000538192 NESP48681 1621 aa16.16■□□□□ 0.18
LRIT2-202ENST00000538192 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
LRIT2-202ENST00000538192 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.18
LRIT2-202ENST00000538192 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
LRIT2-202ENST00000538192 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms