RNA–Protein interactions for RNA: ENST00000347800.6

ABCG1-202, Transcript of ATP binding cassette subfamily G member 1, humanhuman

TSL 1 (best) BASIC

Gene ABCG1, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCG1-202ENST00000347800 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
ABCG1-202ENST00000347800 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
ABCG1-202ENST00000347800 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
ABCG1-202ENST00000347800 CCDC180Q9P1Z9 1646 aa18.8■□□□□ 0.6
ABCG1-202ENST00000347800 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
ABCG1-202ENST00000347800 ZCCHC6Q5VYS8 1495 aaKnown RBP18.69■□□□□ 0.58
ABCG1-202ENST00000347800 ABCC9O60706 1549 aa18.18■□□□□ 0.5
ABCG1-202ENST00000347800 DCAF1Q9Y4B6 1507 aa18.01■□□□□ 0.47
ABCG1-202ENST00000347800 SCRIBQ14160 1630 aa17.95■□□□□ 0.46
ABCG1-202ENST00000347800 HRCP23327 699 aa17.92■□□□□ 0.46
ABCG1-202ENST00000347800 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
ABCG1-202ENST00000347800 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
ABCG1-202ENST00000347800 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
ABCG1-202ENST00000347800 PPARGC1BQ86YN6 1023 aaKnown RBP17.58■□□□□ 0.4
ABCG1-202ENST00000347800 NACADO15069 1562 aa17.57■□□□□ 0.4
ABCG1-202ENST00000347800 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
ABCG1-202ENST00000347800 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
ABCG1-202ENST00000347800 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
ABCG1-202ENST00000347800 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
ABCG1-202ENST00000347800 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
ABCG1-202ENST00000347800 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
ABCG1-202ENST00000347800 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
ABCG1-202ENST00000347800 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
ABCG1-202ENST00000347800 PCGF6Q9BYE7 350 aa17.35■□□□□ 0.37
ABCG1-202ENST00000347800 MYT1Q01538 1121 aa17.3■□□□□ 0.36
ABCG1-202ENST00000347800 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
ABCG1-202ENST00000347800 WIZO95785 1651 aa17.23■□□□□ 0.35
ABCG1-202ENST00000347800 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
ABCG1-202ENST00000347800 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
ABCG1-202ENST00000347800 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
ABCG1-202ENST00000347800 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
ABCG1-202ENST00000347800 SMARCA4P51532 1647 aa16.96■□□□□ 0.31
ABCG1-202ENST00000347800 CCDC88BA6NC98 1476 aa16.9■□□□□ 0.3
ABCG1-202ENST00000347800 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
ABCG1-202ENST00000347800 TOP2AP11388 1531 aaKnown RBP16.84■□□□□ 0.29
ABCG1-202ENST00000347800 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
ABCG1-202ENST00000347800 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
ABCG1-202ENST00000347800 ATAD2BQ9ULI0 1458 aa16.68■□□□□ 0.26
ABCG1-202ENST00000347800 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
ABCG1-202ENST00000347800 SOGA1O94964 1423 aa16.65■□□□□ 0.26
ABCG1-202ENST00000347800 EIF4G1Q04637 1599 aaKnown RBP16.65■□□□□ 0.26
ABCG1-202ENST00000347800 TRIM26Q12899 539 aaPredicted RBP16.64■□□□□ 0.25
ABCG1-202ENST00000347800 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
ABCG1-202ENST00000347800 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
ABCG1-202ENST00000347800 RANGAP1P46060 587 aaPredicted RBP16.61■□□□□ 0.25
ABCG1-202ENST00000347800 UBTFP17480 764 aaKnown RBP16.59■□□□□ 0.25
ABCG1-202ENST00000347800 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
ABCG1-202ENST00000347800 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
ABCG1-202ENST00000347800 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
ABCG1-202ENST00000347800 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
ABCG1-202ENST00000347800 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.23
ABCG1-202ENST00000347800 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
ABCG1-202ENST00000347800 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
ABCG1-202ENST00000347800 CEP162Q5TB80 1403 aa16.37■□□□□ 0.21
ABCG1-202ENST00000347800 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
ABCG1-202ENST00000347800 NCAPD3P42695 1498 aa16.33■□□□□ 0.21
ABCG1-202ENST00000347800 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.27■□□□□ 0.2
ABCG1-202ENST00000347800 TNIKQ9UKE5 1360 aa16.26■□□□□ 0.19
ABCG1-202ENST00000347800 EEA1Q15075 1411 aa16.24■□□□□ 0.19
ABCG1-202ENST00000347800 GOLGA3Q08378 1498 aa16.24■□□□□ 0.19
ABCG1-202ENST00000347800 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
ABCG1-202ENST00000347800 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
ABCG1-202ENST00000347800 BCL11AQ9H165 835 aa16.22■□□□□ 0.19
ABCG1-202ENST00000347800 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
ABCG1-202ENST00000347800 CC2D2AQ9P2K1 1620 aa16.18■□□□□ 0.18
ABCG1-202ENST00000347800 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
ABCG1-202ENST00000347800 CFTRP13569 1480 aa16.15■□□□□ 0.18
ABCG1-202ENST00000347800 CUX1P39880 1505 aa16.15■□□□□ 0.18
ABCG1-202ENST00000347800 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
ABCG1-202ENST00000347800 CLIP1P30622 1438 aa16.14■□□□□ 0.17
ABCG1-202ENST00000347800 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
ABCG1-202ENST00000347800 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
ABCG1-202ENST00000347800 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
ABCG1-202ENST00000347800 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
ABCG1-202ENST00000347800 APLP2Q06481 763 aa16.09■□□□□ 0.17
ABCG1-202ENST00000347800 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
ABCG1-202ENST00000347800 NESP48681 1621 aa16.08■□□□□ 0.16
ABCG1-202ENST00000347800 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
ABCG1-202ENST00000347800 CUX2O14529 1486 aa16.02■□□□□ 0.15
ABCG1-202ENST00000347800 KIF21BO75037 1637 aa16.01■□□□□ 0.15
ABCG1-202ENST00000347800 BIVM-ERCC5R4GMW8 1640 aa16■□□□□ 0.15
ABCG1-202ENST00000347800 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
ABCG1-202ENST00000347800 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
ABCG1-202ENST00000347800 ATP1B4Q9UN42 357 aaPredicted RBP15.96■□□□□ 0.15
ABCG1-202ENST00000347800 FGD5Q6ZNL6 1462 aa15.96■□□□□ 0.15
ABCG1-202ENST00000347800 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
ABCG1-202ENST00000347800 PRXQ9BXM0 1461 aa15.95■□□□□ 0.14
ABCG1-202ENST00000347800 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
ABCG1-202ENST00000347800 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
ABCG1-202ENST00000347800 ANP32EQ9BTT0 268 aa15.93■□□□□ 0.14
ABCG1-202ENST00000347800 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
ABCG1-202ENST00000347800 IGF1RP08069 1367 aa15.92■□□□□ 0.14
ABCG1-202ENST00000347800 PRKCSHP14314 528 aaPredicted RBP15.89■□□□□ 0.13
ABCG1-202ENST00000347800 ITGAEP38570 1179 aa15.89■□□□□ 0.13
ABCG1-202ENST00000347800 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
ABCG1-202ENST00000347800 ARAP1Q96P48 1450 aa15.86■□□□□ 0.13
ABCG1-202ENST00000347800 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
ABCG1-202ENST00000347800 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
ABCG1-202ENST00000347800 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
ABCG1-202ENST00000347800 TOPBP1Q92547 1522 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms