Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AL591424.1-201ENST00000442569 1213 ntBASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AP002472.1-201ENST00000577490 586 ntBASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 SPTSSB-204ENST00000617024 1292 ntBASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 AKAP8P1-201ENST00000434743 1349 ntBASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIML2Q8N7C3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 KRT18P2-201ENST00000447938 1258 ntBASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIML2Q8N7C3 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIML2Q8N7C3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms