Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
LINC00346Q8IVM7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 DNAJB3-202ENST00000449667 1266 ntBASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 OR2I1P-209ENST00000641730 5365 ntBASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00346Q8IVM7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 KRT18P13-201ENST00000400056 1290 ntBASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AC109322.1-201ENST00000524499 1264 ntBASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AGAP7P-201ENST00000582299 2062 ntBASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AGAP14-201ENST00000624701 2060 ntBASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00346Q8IVM7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms