Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 KRT8P48-201ENST00000515599 1220 ntBASIC13.94□□□□□ -0.18
LRRC28Q86X40 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC005840.4-201ENST00000541242 2494 ntBASIC13.94□□□□□ -0.18
LRRC28Q86X40 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC243562.1-201ENST00000560672 389 ntBASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRC28Q86X40 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
LRRC28Q86X40 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 AP001282.1-201ENST00000531301 1499 ntBASIC13.93□□□□□ -0.18
LRRC28Q86X40 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 AC079140.1-201ENST00000508039 487 ntBASIC13.93□□□□□ -0.18
LRRC28Q86X40 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 AC041040.2-201ENST00000622926 2899 ntBASIC13.93□□□□□ -0.18
LRRC28Q86X40 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRRC28Q86X40 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LRRC28Q86X40 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 KRT18P28-201ENST00000453838 1332 ntBASIC13.92□□□□□ -0.18
LRRC28Q86X40 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 AC009090.5-201ENST00000624886 2285 ntBASIC13.92□□□□□ -0.18
LRRC28Q86X40 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRRC28Q86X40 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.92□□□□□ -0.18
LRRC28Q86X40 AL592309.1-201ENST00000443127 649 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms