Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC104457.1-201ENST00000401024 814 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC009407.1-201ENST00000568958 598 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC000095.1-201ENST00000603208 874 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC006538.3-201ENST00000612495 578 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 TCAF2P1-201ENST00000291129 2421 ntBASIC13.62□□□□□ -0.23
HIST1H3AP68431 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST1H3AP68431 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST1H3AP68431 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 AC055876.3-201ENST00000431496 288 ntBASIC13.61□□□□□ -0.23
HIST1H3AP68431 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 AC138649.4-201ENST00000612222 287 ntBASIC13.61□□□□□ -0.23
HIST1H3AP68431 AC004461.2-201ENST00000629517 803 ntBASIC13.61□□□□□ -0.23
HIST1H3AP68431 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 TNRC18P2-201ENST00000417666 2714 ntBASIC13.61□□□□□ -0.23
HIST1H3AP68431 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST1H3AP68431 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST1H3AP68431 AC091951.1-201ENST00000512854 2465 ntBASIC13.61□□□□□ -0.23
HIST1H3AP68431 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST1H3AP68431 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms