Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GBX2P52951 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.96□□□□□ -0.17
GBX2P52951 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GBX2P52951 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
GBX2P52951 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GBX2P52951 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GBX2P52951 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
GBX2P52951 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
GBX2P52951 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.96□□□□□ -0.18
GBX2P52951 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.96□□□□□ -0.18
GBX2P52951 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 AC007191.1-201ENST00000623179 2995 ntBASIC13.95□□□□□ -0.18
GBX2P52951 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 AC002056.1-201ENST00000395613 760 ntBASIC13.95□□□□□ -0.18
GBX2P52951 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 AL031284.1-201ENST00000419297 478 ntBASIC13.95□□□□□ -0.18
GBX2P52951 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 RNA5SP415-201ENST00000517246 115 ntBASIC13.95□□□□□ -0.18
GBX2P52951 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.95□□□□□ -0.18
GBX2P52951 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 AC116407.3-201ENST00000623905 1129 ntBASIC13.95□□□□□ -0.18
GBX2P52951 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.95□□□□□ -0.18
GBX2P52951 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
GBX2P52951 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
GBX2P52951 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GBX2P52951 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.94□□□□□ -0.18
GBX2P52951 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GBX2P52951 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.94□□□□□ -0.18
GBX2P52951 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GBX2P52951 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.94□□□□□ -0.18
GBX2P52951 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.94□□□□□ -0.18
GBX2P52951 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.94□□□□□ -0.18
GBX2P52951 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 KRT8P37-201ENST00000451609 1420 ntBASIC13.94□□□□□ -0.18
GBX2P52951 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 RNA5SP410-201ENST00000516285 106 ntBASIC13.94□□□□□ -0.18
GBX2P52951 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
GBX2P52951 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.94□□□□□ -0.18
GBX2P52951 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.94□□□□□ -0.18
GBX2P52951 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.94□□□□□ -0.18
GBX2P52951 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.94□□□□□ -0.18
GBX2P52951 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.94□□□□□ -0.18
GBX2P52951 AL138918.1-201ENST00000568306 659 ntBASIC13.94□□□□□ -0.18
GBX2P52951 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms