Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC126177.1-201ENST00000547829 2218 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 TSSK5P-201ENST00000423978 907 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 RPL13P2-201ENST00000440687 659 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 TIMM17BP1-201ENST00000545713 516 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 AF228730.6-201ENST00000641497 218 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 AC084121.3-201ENST00000641716 218 ntBASIC13.9□□□□□ -0.18
CSNK1A1P48729 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.9□□□□□ -0.18
CSNK1A1P48729 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CSNK1A1P48729 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.9□□□□□ -0.19
CSNK1A1P48729 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.9□□□□□ -0.19
CSNK1A1P48729 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CSNK1A1P48729 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CSNK1A1P48729 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 BTBD7P1-201ENST00000447253 1453 ntBASIC13.89□□□□□ -0.19
CSNK1A1P48729 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 KRT18P64-201ENST00000434946 1219 ntBASIC13.89□□□□□ -0.19
CSNK1A1P48729 AC009477.1-201ENST00000452936 217 ntBASIC13.89□□□□□ -0.19
CSNK1A1P48729 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 AC023824.1-201ENST00000562945 2975 ntBASIC13.89□□□□□ -0.19
CSNK1A1P48729 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.89□□□□□ -0.19
CSNK1A1P48729 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSNK1A1P48729 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CSNK1A1P48729 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSNK1A1P48729 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CSNK1A1P48729 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms