Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.82□□□□□ -0.04
RORAP35398 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RORAP35398 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 AL365203.3-201ENST00000609742 2057 ntBASIC14.81□□□□□ -0.04
RORAP35398 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RORAP35398 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 MIR658-201ENST00000385210 100 ntBASIC14.81□□□□□ -0.04
RORAP35398 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 SOCS2P1-201ENST00000417727 557 ntBASIC14.81□□□□□ -0.04
RORAP35398 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.81□□□□□ -0.04
RORAP35398 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.81□□□□□ -0.04
RORAP35398 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 MIR4313-201ENST00000580760 101 ntBASIC14.81□□□□□ -0.04
RORAP35398 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 AC233724.13-201ENST00000598383 410 ntBASIC14.81□□□□□ -0.04
RORAP35398 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.81□□□□□ -0.04
RORAP35398 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.81□□□□□ -0.04
RORAP35398 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.81□□□□□ -0.04
RORAP35398 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.81□□□□□ -0.04
RORAP35398 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RORAP35398 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 C1QBPP1-201ENST00000400117 770 ntBASIC14.8□□□□□ -0.04
RORAP35398 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.8□□□□□ -0.04
RORAP35398 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.8□□□□□ -0.04
RORAP35398 AC234783.1-201ENST00000441761 496 ntBASIC14.8□□□□□ -0.04
RORAP35398 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.8□□□□□ -0.04
RORAP35398 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 AC119751.2-201ENST00000504529 210 ntBASIC14.8□□□□□ -0.04
RORAP35398 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 SLC25A47P1-201ENST00000531577 414 ntBASIC14.8□□□□□ -0.04
RORAP35398 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.8□□□□□ -0.04
RORAP35398 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.8□□□□□ -0.04
RORAP35398 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.8□□□□□ -0.04
RORAP35398 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.8□□□□□ -0.04
RORAP35398 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.8□□□□□ -0.04
RORAP35398 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RORAP35398 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.8□□□□□ -0.04
RORAP35398 AC018665.1-201ENST00000622927 1362 ntBASIC14.8□□□□□ -0.04
RORAP35398 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RORAP35398 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms