Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 AC099336.1-202ENST00000602961 463 ntBASIC13.88□□□□□ -0.19
CD40LGP29965 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 NSUN5P1-202ENST00000421140 1535 ntBASIC13.88□□□□□ -0.19
CD40LGP29965 NSUN5P2-203ENST00000457352 1529 ntBASIC13.88□□□□□ -0.19
CD40LGP29965 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CD40LGP29965 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.88□□□□□ -0.19
CD40LGP29965 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
CD40LGP29965 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 PMS2P1-201ENST00000431037 1228 ntBASIC13.87□□□□□ -0.19
CD40LGP29965 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 KRT16P4-201ENST00000453883 522 ntBASIC13.87□□□□□ -0.19
CD40LGP29965 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40LGP29965 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CD40LGP29965 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.87□□□□□ -0.19
CD40LGP29965 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD40LGP29965 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 AL023775.1-201ENST00000454907 1746 ntBASIC13.87□□□□□ -0.19
CD40LGP29965 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD40LGP29965 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.87□□□□□ -0.19
CD40LGP29965 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.87□□□□□ -0.19
CD40LGP29965 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 AC138969.2-201ENST00000532739 9932 ntBASIC13.86□□□□□ -0.19
CD40LGP29965 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CD40LGP29965 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD40LGP29965 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD40LGP29965 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.86□□□□□ -0.19
CD40LGP29965 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD40LGP29965 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms