Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.41■□□□□ 0.38
CASP1P29466 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.41■□□□□ 0.38
CASP1P29466 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.41■□□□□ 0.38
CASP1P29466 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.41■□□□□ 0.38
CASP1P29466 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.41■□□□□ 0.38
CASP1P29466 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.41■□□□□ 0.38
CASP1P29466 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CASP1P29466 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CASP1P29466 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CASP1P29466 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CASP1P29466 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP1P29466 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CASP1P29466 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 MIR943-201ENST00000401286 94 ntBASIC17.4■□□□□ 0.38
CASP1P29466 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.4■□□□□ 0.38
CASP1P29466 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.4■□□□□ 0.38
CASP1P29466 AC015911.4-201ENST00000588022 1070 ntBASIC17.4■□□□□ 0.38
CASP1P29466 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.4■□□□□ 0.38
CASP1P29466 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 AL590560.3-201ENST00000623350 461 ntBASIC17.4■□□□□ 0.38
CASP1P29466 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CASP1P29466 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP1P29466 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CASP1P29466 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.4■□□□□ 0.38
CASP1P29466 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.4■□□□□ 0.38
CASP1P29466 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CASP1P29466 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CASP1P29466 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CASP1P29466 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CASP1P29466 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CASP1P29466 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.39■□□□□ 0.37
CASP1P29466 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.39■□□□□ 0.37
CASP1P29466 AC015922.1-201ENST00000421102 1152 ntBASIC17.39■□□□□ 0.37
CASP1P29466 TSSK5P-201ENST00000423978 907 ntBASIC17.39■□□□□ 0.37
CASP1P29466 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.39■□□□□ 0.37
CASP1P29466 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 SPDYE18-201ENST00000510091 1050 ntBASIC17.39■□□□□ 0.37
CASP1P29466 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP1P29466 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.39■□□□□ 0.37
CASP1P29466 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.39■□□□□ 0.37
CASP1P29466 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 AC015910.1-201ENST00000579400 975 ntBASIC17.39■□□□□ 0.37
CASP1P29466 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 REXO1L2P-201ENST00000425429 2069 ntBASIC17.39■□□□□ 0.37
CASP1P29466 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 AP000845.1-201ENST00000581677 2131 ntBASIC17.39■□□□□ 0.37
CASP1P29466 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.39■□□□□ 0.37
CASP1P29466 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CASP1P29466 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CASP1P29466 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP1P29466 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CASP1P29466 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CASP1P29466 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CASP1P29466 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms