Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 GHSR-202ENST00000427970 912 ntBASIC16.61■□□□□ 0.25
FAM228BP0C875 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM228BP0C875 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM228BP0C875 SLED1-202ENST00000512051 380 ntBASIC16.61■□□□□ 0.25
FAM228BP0C875 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.61■□□□□ 0.25
FAM228BP0C875 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.61■□□□□ 0.25
FAM228BP0C875 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM228BP0C875 AC015910.1-201ENST00000579400 975 ntBASIC16.61■□□□□ 0.25
FAM228BP0C875 AP001059.3-201ENST00000619053 235 ntBASIC16.61■□□□□ 0.25
FAM228BP0C875 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.61■□□□□ 0.25
FAM228BP0C875 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
FAM228BP0C875 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
FAM228BP0C875 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
FAM228BP0C875 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
FAM228BP0C875 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.6■□□□□ 0.25
FAM228BP0C875 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.6■□□□□ 0.25
FAM228BP0C875 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 AC005089.1-201ENST00000619486 2241 ntBASIC16.6■□□□□ 0.25
FAM228BP0C875 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
FAM228BP0C875 AC025048.3-201ENST00000590609 569 ntBASIC16.6■□□□□ 0.25
FAM228BP0C875 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.6■□□□□ 0.25
FAM228BP0C875 AL589739.1-201ENST00000607720 493 ntBASIC16.6■□□□□ 0.25
FAM228BP0C875 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM228BP0C875 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 AC005702.4-201ENST00000618393 416 ntBASIC16.6■□□□□ 0.25
FAM228BP0C875 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM228BP0C875 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.6■□□□□ 0.25
FAM228BP0C875 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.6■□□□□ 0.25
FAM228BP0C875 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FAM228BP0C875 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM228BP0C875 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FAM228BP0C875 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FAM228BP0C875 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FAM228BP0C875 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.59■□□□□ 0.25
FAM228BP0C875 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM228BP0C875 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 RPL37AP1-201ENST00000412502 279 ntBASIC16.59■□□□□ 0.25
FAM228BP0C875 UPF3AP3-201ENST00000420996 769 ntBASIC16.59■□□□□ 0.25
FAM228BP0C875 FAM8A3P-201ENST00000427218 844 ntBASIC16.59■□□□□ 0.25
FAM228BP0C875 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM228BP0C875 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM228BP0C875 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 MIR3687-2-201ENST00000577708 61 ntBASIC16.59■□□□□ 0.25
FAM228BP0C875 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.59■□□□□ 0.25
FAM228BP0C875 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
FAM228BP0C875 MIR3687-1-201ENST00000614492 61 ntBASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms