Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 FAM90A12P-201ENST00000519497 2375 ntBASIC12.5□□□□□ -0.41
APOC3P02656 FAM90A24P-201ENST00000520792 2369 ntBASIC12.5□□□□□ -0.41
APOC3P02656 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.49□□□□□ -0.41
APOC3P02656 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 AC068472.1-201ENST00000474589 881 ntBASIC12.49□□□□□ -0.41
APOC3P02656 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC12.49□□□□□ -0.41
APOC3P02656 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.49□□□□□ -0.41
APOC3P02656 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
APOC3P02656 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 MYC-209ENST00000641252 345 ntBASIC12.49□□□□□ -0.41
APOC3P02656 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC3P02656 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC3P02656 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC3P02656 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
APOC3P02656 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.48□□□□□ -0.41
APOC3P02656 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.48□□□□□ -0.41
APOC3P02656 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
APOC3P02656 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms