Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.39□□□□□ -0.43
IFNA1P01562 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 AC134407.2-201ENST00000625089 1978 ntBASIC12.39□□□□□ -0.43
IFNA1P01562 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
IFNA1P01562 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.39□□□□□ -0.43
IFNA1P01562 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.39□□□□□ -0.43
IFNA1P01562 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
IFNA1P01562 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.38□□□□□ -0.43
IFNA1P01562 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 BX664615.1-201ENST00000443558 458 ntBASIC12.38□□□□□ -0.43
IFNA1P01562 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
IFNA1P01562 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 TCAF1P1-201ENST00000414990 2232 ntBASIC12.38□□□□□ -0.43
IFNA1P01562 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
IFNA1P01562 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.38□□□□□ -0.43
IFNA1P01562 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
IFNA1P01562 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
IFNA1P01562 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.37□□□□□ -0.43
IFNA1P01562 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
IFNA1P01562 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms