Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC19.76■□□□□ 0.75
KCNQ3O43525 AC005695.3-201ENST00000614522 232 ntBASIC19.76■□□□□ 0.75
KCNQ3O43525 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 AC018735.1-201ENST00000437208 1502 ntBASIC19.76■□□□□ 0.75
KCNQ3O43525 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.76■□□□□ 0.75
KCNQ3O43525 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KCNQ3O43525 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNQ3O43525 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNQ3O43525 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.75■□□□□ 0.75
KCNQ3O43525 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 TPM3P8-201ENST00000330554 643 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.75■□□□□ 0.75
KCNQ3O43525 CD8B2-202ENST00000417670 633 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 GPAA1P2-201ENST00000417923 928 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 CNN2P10-201ENST00000443067 918 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 AC104306.2-201ENST00000451877 341 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCNQ3O43525 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
KCNQ3O43525 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 AC008894.3-201ENST00000624324 3103 ntBASIC19.75■□□□□ 0.75
KCNQ3O43525 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KCNQ3O43525 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KCNQ3O43525 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNQ3O43525 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.75■□□□□ 0.75
KCNQ3O43525 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 AC104457.1-201ENST00000401024 814 ntBASIC19.74■□□□□ 0.75
KCNQ3O43525 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.74■□□□□ 0.75
KCNQ3O43525 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 AL133338.1-201ENST00000565695 1517 ntBASIC19.74■□□□□ 0.75
KCNQ3O43525 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KCNQ3O43525 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.74■□□□□ 0.75
KCNQ3O43525 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
KCNQ3O43525 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
KCNQ3O43525 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KCNQ3O43525 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNQ3O43525 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 AL354989.2-201ENST00000435838 1540 ntBASIC19.73■□□□□ 0.75
KCNQ3O43525 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNQ3O43525 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNQ3O43525 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
KCNQ3O43525 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KCNQ3O43525 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.73■□□□□ 0.75
KCNQ3O43525 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.73■□□□□ 0.75
KCNQ3O43525 AL645937.2-201ENST00000396808 931 ntBASIC19.73■□□□□ 0.75
KCNQ3O43525 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms