Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.36□□□□□ -0.11
TO15178 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TO15178 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
TO15178 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
TO15178 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 AC099063.4-201ENST00000641099 1602 ntBASIC14.35□□□□□ -0.11
TO15178 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TO15178 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.35□□□□□ -0.11
TO15178 RPL13AP25-201ENST00000484130 612 ntBASIC14.35□□□□□ -0.11
TO15178 GAPDHP40-201ENST00000505218 1006 ntBASIC14.35□□□□□ -0.11
TO15178 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.35□□□□□ -0.11
TO15178 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.35□□□□□ -0.11
TO15178 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
TO15178 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.35□□□□□ -0.11
TO15178 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
TO15178 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.35□□□□□ -0.11
TO15178 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TO15178 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TO15178 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.35□□□□□ -0.11
TO15178 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 AC136621.1-201ENST00000624017 2304 ntBASIC14.35□□□□□ -0.11
TO15178 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TO15178 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TO15178 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.34□□□□□ -0.11
TO15178 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.34□□□□□ -0.11
TO15178 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TO15178 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TO15178 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TO15178 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 AC104596.2-201ENST00000512793 793 ntBASIC14.34□□□□□ -0.11
TO15178 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.34□□□□□ -0.11
TO15178 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.34□□□□□ -0.11
TO15178 AC190387.1-201ENST00000551683 408 ntBASIC14.34□□□□□ -0.11
TO15178 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.34□□□□□ -0.11
TO15178 AC138761.1-201ENST00000584393 385 ntBASIC14.34□□□□□ -0.11
TO15178 BRI3BPP1-201ENST00000594224 787 ntBASIC14.34□□□□□ -0.11
TO15178 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.34□□□□□ -0.11
TO15178 CHCHD2P3-201ENST00000603038 451 ntBASIC14.34□□□□□ -0.11
TO15178 TMEM261P1-201ENST00000604899 340 ntBASIC14.34□□□□□ -0.11
TO15178 AL662799.1-202ENST00000614205 422 ntBASIC14.34□□□□□ -0.11
TO15178 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.34□□□□□ -0.11
TO15178 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.34□□□□□ -0.11
TO15178 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TO15178 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TO15178 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms