Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SDCBPO00560 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SDCBPO00560 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SDCBPO00560 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.33□□□□□ -0.28
SDCBPO00560 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 AL390755.1-201ENST00000623716 2027 ntBASIC13.32□□□□□ -0.28
SDCBPO00560 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.32□□□□□ -0.28
SDCBPO00560 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.32□□□□□ -0.28
SDCBPO00560 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 RNA5SP410-201ENST00000516285 106 ntBASIC13.32□□□□□ -0.28
SDCBPO00560 PGAM5P1-201ENST00000518923 814 ntBASIC13.32□□□□□ -0.28
SDCBPO00560 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.32□□□□□ -0.28
SDCBPO00560 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.32□□□□□ -0.28
SDCBPO00560 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SDCBPO00560 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 BNIP3P1-202ENST00000550043 1585 ntBASIC13.32□□□□□ -0.28
SDCBPO00560 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SDCBPO00560 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.32□□□□□ -0.28
SDCBPO00560 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SDCBPO00560 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
SDCBPO00560 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.31□□□□□ -0.28
SDCBPO00560 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SDCBPO00560 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.31□□□□□ -0.28
SDCBPO00560 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.31□□□□□ -0.28
SDCBPO00560 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.31□□□□□ -0.28
SDCBPO00560 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SDCBPO00560 REXO1L1P-202ENST00000608646 1974 ntBASIC13.31□□□□□ -0.28
SDCBPO00560 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SDCBPO00560 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SDCBPO00560 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SDCBPO00560 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms