Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
UPK1AO00322 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UPK1AO00322 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.77□□□□□ -0.04
UPK1AO00322 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UPK1AO00322 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.77□□□□□ -0.04
UPK1AO00322 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
UPK1AO00322 FO538757.1-201ENST00000623083 1397 ntBASIC14.77□□□□□ -0.04
UPK1AO00322 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UPK1AO00322 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
UPK1AO00322 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.77□□□□□ -0.04
UPK1AO00322 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 KLF2P3-201ENST00000451977 1087 ntBASIC14.77□□□□□ -0.05
UPK1AO00322 AC125807.1-201ENST00000483097 614 ntBASIC14.77□□□□□ -0.05
UPK1AO00322 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1AO00322 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.77□□□□□ -0.05
UPK1AO00322 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.77□□□□□ -0.05
UPK1AO00322 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 SPDYE12P-201ENST00000618416 771 ntBASIC14.77□□□□□ -0.05
UPK1AO00322 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 AC005840.4-201ENST00000541242 2494 ntBASIC14.77□□□□□ -0.05
UPK1AO00322 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UPK1AO00322 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
UPK1AO00322 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UPK1AO00322 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 KRT18P28-201ENST00000453838 1332 ntBASIC14.76□□□□□ -0.05
UPK1AO00322 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.76□□□□□ -0.05
UPK1AO00322 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UPK1AO00322 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 TARDBPP1-201ENST00000442013 1203 ntBASIC14.76□□□□□ -0.05
UPK1AO00322 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1AO00322 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1AO00322 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1AO00322 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.76□□□□□ -0.05
UPK1AO00322 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.76□□□□□ -0.05
UPK1AO00322 AL138828.2-201ENST00000615812 383 ntBASIC14.76□□□□□ -0.05
UPK1AO00322 MIR6069-201ENST00000620069 79 ntBASIC14.76□□□□□ -0.05
UPK1AO00322 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 AL033527.5-202ENST00000641632 1098 ntBASIC14.76□□□□□ -0.05
UPK1AO00322 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
UPK1AO00322 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
UPK1AO00322 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UPK1AO00322 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms