Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC007663.1-201ENST00000438948 1240 ntBASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMEM198B-204ENST00000484016 896 ntBASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NAPSB-206ENST00000562112 1266 ntBASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AC134407.2-201ENST00000625089 1978 ntBASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.62□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BOLA2-SMG1P6H3BVE0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms