Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 AL355864.2-201ENST00000447420 863 ntBASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SNX29P1-201ENST00000548357 1007 ntBASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 RPSAP52-203ENST00000622976 1023 ntBASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 AL033527.4-201ENST00000641026 673 ntBASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SSX2IPQ9Y2D8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 REXO1L1P-202ENST00000608646 1974 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 C1QBPP1-201ENST00000400117 770 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AC068587.3-201ENST00000526613 355 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AC124283.3-201ENST00000570869 594 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AL049840.4-201ENST00000602422 811 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 AC007950.2-201ENST00000615045 2347 ntBASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SSX2IPQ9Y2D8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSX2IPQ9Y2D8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms