Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC126365.1-201ENST00000578585 1514 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 AC005089.1-201ENST00000619486 2241 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 RNA5SP416-201ENST00000516838 111 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
PIF1Q9H611 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.99□□□□□ -0.01
PIF1Q9H611 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.99□□□□□ -0.01
PIF1Q9H611 AC064836.3-201ENST00000607928 673 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.99□□□□□ -0.01
PIF1Q9H611 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.99□□□□□ -0.01
PIF1Q9H611 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.99□□□□□ -0.01
PIF1Q9H611 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PIF1Q9H611 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.99□□□□□ -0.01
PIF1Q9H611 FGD5P1-202ENST00000614866 2498 ntBASIC14.99□□□□□ -0.01
PIF1Q9H611 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PIF1Q9H611 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PIF1Q9H611 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.98□□□□□ -0.01
PIF1Q9H611 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 KRT18P58-201ENST00000527480 1120 ntBASIC14.98□□□□□ -0.01
PIF1Q9H611 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.98□□□□□ -0.01
PIF1Q9H611 KRT19P2-202ENST00000557173 1012 ntBASIC14.98□□□□□ -0.01
PIF1Q9H611 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.98□□□□□ -0.01
PIF1Q9H611 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PIF1Q9H611 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.98□□□□□ -0.01
PIF1Q9H611 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
PIF1Q9H611 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.98□□□□□ -0.01
PIF1Q9H611 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PIF1Q9H611 AJ011931.1-201ENST00000618749 2492 ntBASIC14.98□□□□□ -0.01
PIF1Q9H611 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AC007191.1-201ENST00000623179 2995 ntBASIC14.97□□□□□ -0.01
PIF1Q9H611 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.97□□□□□ -0.01
PIF1Q9H611 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PIF1Q9H611 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PIF1Q9H611 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms