Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC099063.4-201ENST00000641099 1602 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 MYO15B-237ENST00000642007 4893 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 LINC02228-204ENST00000642115 2962 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SPDYE17-201ENST00000412399 783 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC093214.1-201ENST00000511688 1107 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AC006486.2-201ENST00000624246 2199 ntBASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
YIPF4Q9BSR8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 CETN4P-206ENST00000642099 2168 ntBASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 AL035633.1-201ENST00000406139 838 ntBASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
YIPF4Q9BSR8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
YIPF4Q9BSR8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms