Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC10.38□□□□□ -0.75
LITAFQ99732 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC10.38□□□□□ -0.75
LITAFQ99732 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LITAFQ99732 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 PMS2P7-201ENST00000506558 1336 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LITAFQ99732 AC005521.1-201ENST00000393351 872 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 AC004987.2-201ENST00000395959 1148 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LITAFQ99732 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LITAFQ99732 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.37□□□□□ -0.75
LITAFQ99732 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 AC104819.1-201ENST00000504587 486 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 KRT18P31-201ENST00000506277 1292 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 MSRA-206ENST00000521209 814 ntTSL 3 BASIC10.37□□□□□ -0.75
LITAFQ99732 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.37□□□□□ -0.75
LITAFQ99732 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.37□□□□□ -0.75
LITAFQ99732 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.37□□□□□ -0.75
LITAFQ99732 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 AL078644.1-201ENST00000609881 752 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC10.37□□□□□ -0.75
LITAFQ99732 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 AL365209.1-201ENST00000624418 6473 ntBASIC10.37□□□□□ -0.75
LITAFQ99732 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LITAFQ99732 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LITAFQ99732 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LITAFQ99732 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LITAFQ99732 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LITAFQ99732 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.36□□□□□ -0.75
LITAFQ99732 KRT8P24-201ENST00000560290 1559 ntBASIC10.36□□□□□ -0.75
LITAFQ99732 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LITAFQ99732 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
LITAFQ99732 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms