Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AC106881.1-201ENST00000605849 3329 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 IGHV3-42-201ENST00000520410 361 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AL158211.3-201ENST00000607385 239 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 AL844908.2-201ENST00000609461 460 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AL109936.8-201ENST00000641772 604 ntBASIC15.86■□□□□ 0.13
RTP4Q96DX8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RTP4Q96DX8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTP4Q96DX8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC012508.2-201ENST00000567613 1472 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC236430.1-201ENST00000402231 743 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 TSPY16P-201ENST00000449843 468 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC069120.2-201ENST00000524091 540 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AC239800.4-201ENST00000603712 296 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AL390754.1-201ENST00000619088 582 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 REXO1L4P-201ENST00000605109 1937 ntBASIC15.85■□□□□ 0.13
RTP4Q96DX8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTP4Q96DX8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
RTP4Q96DX8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms