Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AGAP7P-201ENST00000582299 2062 ntBASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AGAP14-201ENST00000624701 2060 ntBASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 AC023824.1-201ENST00000562945 2975 ntBASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDH19Q8TAB3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AC092337.1-201ENST00000568699 1129 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AC138969.3-201ENST00000546612 1459 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AC138932.2-201ENST00000548268 1459 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AC126755.4-201ENST00000549796 1459 ntBASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PCDH19Q8TAB3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH19Q8TAB3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 KRT18P43-201ENST00000469825 1281 ntBASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 SPDYE18-201ENST00000510091 1050 ntBASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC008738.7-201ENST00000609744 511 ntBASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC004840.1-201ENST00000636359 365 ntBASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH19Q8TAB3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH19Q8TAB3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms