Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CICP13-201ENST00000422015 2789 ntBASIC23.81■■□□□ 1.4
CFAP43Q8NDM7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFAP43Q8NDM7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CFAP43Q8NDM7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 TPM3P8-201ENST00000330554 643 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 RPSAP31-201ENST00000416648 895 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 NOC2LP1-201ENST00000450578 752 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 AC005740.2-201ENST00000511085 419 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 MIR3147-201ENST00000577811 66 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 AL603764.1-201ENST00000636452 321 ntBASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP43Q8NDM7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 FGFR3P1-201ENST00000449999 601 ntBASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AC019193.1-201ENST00000506678 823 ntBASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AC004466.1-201ENST00000599515 1080 ntBASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP43Q8NDM7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 AC055811.4-201ENST00000624039 1754 ntBASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 AL136309.1-201ENST00000403917 691 ntBASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 RPL13AP19-201ENST00000434320 584 ntBASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 AL353637.1-201ENST00000451571 732 ntBASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP43Q8NDM7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 AC100850.1-201ENST00000506768 649 ntBASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 AL023803.2-201ENST00000620080 638 ntBASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 HLA-DQB2-231ENST00000435145 2026 ntBASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 MST1L-201ENST00000442552 2185 ntBASIC23.77■■□□□ 1.4
CFAP43Q8NDM7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CFAP43Q8NDM7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.39
CFAP43Q8NDM7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CFAP43Q8NDM7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CFAP43Q8NDM7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
CFAP43Q8NDM7 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms