Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CROCCP3Q8IVE0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 Z69720.1-201ENST00000601483 472 ntBASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 AC083849.1-201ENST00000615227 514 ntBASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.2□□□□□ -0.14
CROCCP3Q8IVE0 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 CICP16-201ENST00000502609 2813 ntBASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PMS2P1-201ENST00000431037 1228 ntBASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 AC245100.5-201ENST00000452108 331 ntBASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 AC087163.2-201ENST00000457299 853 ntBASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.19□□□□□ -0.14
CROCCP3Q8IVE0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.18□□□□□ -0.14
CROCCP3Q8IVE0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms