Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AC009090.5-201ENST00000624886 2285 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 RPL5P21-201ENST00000404620 815 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AL512384.1-201ENST00000406683 331 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 RN7SL837P-201ENST00000463010 287 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AC107373.2-201ENST00000607735 490 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 CU634019.7-201ENST00000624153 1185 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 FP236241.2-201ENST00000624906 1185 ntBASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.27■□□□□ 0.04
LRRTM4Q86VH4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRRTM4Q86VH4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 ENPP7P5-201ENST00000541031 1031 ntBASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 AC093813.1-201ENST00000605066 256 ntBASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRTM4Q86VH4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 AC090616.6-203ENST00000579186 1945 ntBASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms