Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CDR2Q01850 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CDR2Q01850 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDR2Q01850 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 AC087499.5-201ENST00000452760 1342 ntBASIC16.65■□□□□ 0.26
CDR2Q01850 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
CDR2Q01850 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDR2Q01850 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDR2Q01850 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.64■□□□□ 0.26
CDR2Q01850 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDR2Q01850 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CDR2Q01850 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.64■□□□□ 0.26
CDR2Q01850 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
CDR2Q01850 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDR2Q01850 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDR2Q01850 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.64■□□□□ 0.25
CDR2Q01850 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CDR2Q01850 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 FAM86GP-201ENST00000448322 971 ntBASIC16.64■□□□□ 0.25
CDR2Q01850 SDHAP3-202ENST00000515467 728 ntBASIC16.64■□□□□ 0.25
CDR2Q01850 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.64■□□□□ 0.25
CDR2Q01850 AL158211.3-201ENST00000607385 239 ntBASIC16.64■□□□□ 0.25
CDR2Q01850 AC139530.3-201ENST00000620344 690 ntBASIC16.64■□□□□ 0.25
CDR2Q01850 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDR2Q01850 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CDR2Q01850 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
CDR2Q01850 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CDR2Q01850 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDR2Q01850 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CDR2Q01850 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 AGAP7P-201ENST00000582299 2062 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 AGAP14-201ENST00000624701 2060 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.63■□□□□ 0.25
CDR2Q01850 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 AL133267.1-201ENST00000398220 340 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.63■□□□□ 0.25
CDR2Q01850 AC097493.3-201ENST00000509725 367 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.63■□□□□ 0.25
CDR2Q01850 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.63■□□□□ 0.25
CDR2Q01850 AL844908.2-201ENST00000609461 460 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CDR2Q01850 AL109936.8-201ENST00000641772 604 ntBASIC16.63■□□□□ 0.25
CDR2Q01850 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDR2Q01850 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.63■□□□□ 0.25
CDR2Q01850 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDR2Q01850 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms