Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX16P57768 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
SNX16P57768 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 AC132872.4-202ENST00000622924 2756 ntBASIC16.47■□□□□ 0.23
SNX16P57768 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX16P57768 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX16P57768 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.47■□□□□ 0.23
SNX16P57768 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.47■□□□□ 0.23
SNX16P57768 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNX16P57768 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX16P57768 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
SNX16P57768 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX16P57768 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.46■□□□□ 0.23
SNX16P57768 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.46■□□□□ 0.23
SNX16P57768 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX16P57768 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.46■□□□□ 0.23
SNX16P57768 AC136621.1-201ENST00000624017 2304 ntBASIC16.46■□□□□ 0.23
SNX16P57768 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.46■□□□□ 0.23
SNX16P57768 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNX16P57768 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNX16P57768 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SNX16P57768 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.46■□□□□ 0.22
SNX16P57768 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.45■□□□□ 0.22
SNX16P57768 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX16P57768 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.45■□□□□ 0.22
SNX16P57768 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX16P57768 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 DOC2GP-202ENST00000514950 1163 ntBASIC16.45■□□□□ 0.22
SNX16P57768 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.45■□□□□ 0.22
SNX16P57768 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.45■□□□□ 0.22
SNX16P57768 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.45■□□□□ 0.22
SNX16P57768 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.45■□□□□ 0.22
SNX16P57768 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.45■□□□□ 0.22
SNX16P57768 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.45■□□□□ 0.22
SNX16P57768 AC004840.1-201ENST00000636359 365 ntBASIC16.45■□□□□ 0.22
SNX16P57768 AL645728.2-202ENST00000641679 227 ntBASIC16.45■□□□□ 0.22
SNX16P57768 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.45■□□□□ 0.22
SNX16P57768 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SNX16P57768 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNX16P57768 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNX16P57768 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX16P57768 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNX16P57768 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
SNX16P57768 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNX16P57768 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms