Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
HMGA2P52926 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGA2P52926 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGA2P52926 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HMGA2P52926 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HMGA2P52926 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGA2P52926 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGA2P52926 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HMGA2P52926 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 AL133267.1-201ENST00000398220 340 ntBASIC14.21□□□□□ -0.13
HMGA2P52926 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGA2P52926 MED15P5-201ENST00000423150 992 ntBASIC14.21□□□□□ -0.13
HMGA2P52926 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.21□□□□□ -0.13
HMGA2P52926 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGA2P52926 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGA2P52926 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.21□□□□□ -0.13
HMGA2P52926 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 AL133215.2-201ENST00000609242 977 ntBASIC14.21□□□□□ -0.13
HMGA2P52926 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGA2P52926 AC018529.2-202ENST00000611482 3087 ntBASIC14.21□□□□□ -0.13
HMGA2P52926 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGA2P52926 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGA2P52926 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
HMGA2P52926 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HMGA2P52926 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.21□□□□□ -0.14
HMGA2P52926 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HMGA2P52926 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.21□□□□□ -0.14
HMGA2P52926 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HMGA2P52926 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGA2P52926 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.2□□□□□ -0.14
HMGA2P52926 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGA2P52926 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGA2P52926 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.2□□□□□ -0.14
HMGA2P52926 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 AC018529.1-201ENST00000613063 361 ntBASIC14.2□□□□□ -0.14
HMGA2P52926 BX640515.1-201ENST00000617215 977 ntBASIC14.2□□□□□ -0.14
HMGA2P52926 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HMGA2P52926 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HMGA2P52926 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HMGA2P52926 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms